Qfyilyi

Note that I'm using my office system which is connected to a larger network and some of the paths mentioned in the following are shared between all users.

Summary: I am trying to run a python code. when I run it, it returns an ImportError: No module named scipy error, and when I try to install it, it returns and error saying that it is already installed with this message: Requirement already satisfied

Details:
I am trying to run a python code with a Makefile which in the header has this line:

python=PYTHONPATH=. pypy3

and these are the results for running which on my system:

[amir@lin physlr]$ which python3

/gsc/btl/linuxbrew/bin/python3

[amir@lin physlr]$ which pypy3

/gsc/btl/linuxbrew/bin/pypy3

So all of them are from linuxbrew. Now, When I run the code using the Makefile, It says:

ImportError: No module named 'scipy'

make: *** [Makefile:317: f1chr4.physlr.tsv] Error 1

make: *** Deleting file 'f1chr4.physlr.tsv'

So I tried to install scipy using pip3 and here is the result:

[amir@lin physlr]$ pip3 install --user scipy

Requirement already satisfied: scipy in /home/aafshinfard/.local/lib/python3.7/site-packages (1.1.0)

Requirement already satisfied: numpy>=1.8.2 in /home/aafshinfard/.local/lib/python3.7/site-packages (from scipy) (1.15.4)

and yes, when I try pip3 show scipt it says:

[amir@lin physlr]$ pip3 show scipy

Name: scipy

Version: 1.1.0

Summary: SciPy: Scientific Library for Python

Home-page: https://www.scipy.org

Author: None

Author-email: None

License: BSD

Location: /home/amir/.local/lib/python3.7/site-packages

Requires: numpy

Required-by: scikit-learn

which is different from /gsc/btl/linuxbrew/ ...

It seems I need to install the package with pip_pypy3 as when I try
pip_pypy3 show scipy it returns nothing which means it is not installed. But for that I need some permission which I cannot obtain now.
Does anybody have suggestion or solutions?