How to do mysql_upgrade for a particular database table











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i am facing issue regarding mysql.user's table in mysql 5.6.36 server , previously my slave used to be on 5.6.22 version and we have taken a dump and migrated to new server , but due to version incompatibility we are unable to create new users , it is giving error to upgrade , is there anyway so that i can just upgrade only mysql.user table instead of running mysql_upgrade on entire slave databases.



ERROR :



Column count of mysql.user is wrong. Expected 43, found 42. Created with MySQL 50622, now running 50636. Please use mysql_upgrade to fix this error.










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migrated from stackoverflow.com Nov 22 at 22:03


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  • Have you read the documentation: dev.mysql.com/doc/refman/5.6/en/mysql-upgrade.html
    – Bill Karwin
    Nov 22 at 17:54















up vote
0
down vote

favorite












i am facing issue regarding mysql.user's table in mysql 5.6.36 server , previously my slave used to be on 5.6.22 version and we have taken a dump and migrated to new server , but due to version incompatibility we are unable to create new users , it is giving error to upgrade , is there anyway so that i can just upgrade only mysql.user table instead of running mysql_upgrade on entire slave databases.



ERROR :



Column count of mysql.user is wrong. Expected 43, found 42. Created with MySQL 50622, now running 50636. Please use mysql_upgrade to fix this error.










share|improve this question













migrated from stackoverflow.com Nov 22 at 22:03


This question came from our site for professional and enthusiast programmers.















  • Have you read the documentation: dev.mysql.com/doc/refman/5.6/en/mysql-upgrade.html
    – Bill Karwin
    Nov 22 at 17:54













up vote
0
down vote

favorite









up vote
0
down vote

favorite











i am facing issue regarding mysql.user's table in mysql 5.6.36 server , previously my slave used to be on 5.6.22 version and we have taken a dump and migrated to new server , but due to version incompatibility we are unable to create new users , it is giving error to upgrade , is there anyway so that i can just upgrade only mysql.user table instead of running mysql_upgrade on entire slave databases.



ERROR :



Column count of mysql.user is wrong. Expected 43, found 42. Created with MySQL 50622, now running 50636. Please use mysql_upgrade to fix this error.










share|improve this question













i am facing issue regarding mysql.user's table in mysql 5.6.36 server , previously my slave used to be on 5.6.22 version and we have taken a dump and migrated to new server , but due to version incompatibility we are unable to create new users , it is giving error to upgrade , is there anyway so that i can just upgrade only mysql.user table instead of running mysql_upgrade on entire slave databases.



ERROR :



Column count of mysql.user is wrong. Expected 43, found 42. Created with MySQL 50622, now running 50636. Please use mysql_upgrade to fix this error.







mysql






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asked Nov 22 at 17:42









JABIR BAIG

83




83




migrated from stackoverflow.com Nov 22 at 22:03


This question came from our site for professional and enthusiast programmers.






migrated from stackoverflow.com Nov 22 at 22:03


This question came from our site for professional and enthusiast programmers.














  • Have you read the documentation: dev.mysql.com/doc/refman/5.6/en/mysql-upgrade.html
    – Bill Karwin
    Nov 22 at 17:54


















  • Have you read the documentation: dev.mysql.com/doc/refman/5.6/en/mysql-upgrade.html
    – Bill Karwin
    Nov 22 at 17:54
















Have you read the documentation: dev.mysql.com/doc/refman/5.6/en/mysql-upgrade.html
– Bill Karwin
Nov 22 at 17:54




Have you read the documentation: dev.mysql.com/doc/refman/5.6/en/mysql-upgrade.html
– Bill Karwin
Nov 22 at 17:54










2 Answers
2






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0
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You need to run mysql-upgrade --upgrade-system-tables (See Documentation)



This will bypass checking all other tables and focus just on the mysql schema.






share|improve this answer




























    up vote
    0
    down vote













    I was able to upgrade only one table of my database this way : It worked for me. My scenario. MySQL 5.1 to 5.6 only I run into a problem upgrading one of my databases table (the biggest one), did not dump correctly and was rejected during upload to new server, took forever and timed out several times, so I had to do something out of the books. (Before you do download your database, do a complete backup, repair, check and all the maintenance required so you dont have messed up data in your new upload. Also, do a direct wire transfer, dont use wireless with large databases.



    1 - All my tables, except the biggest one, uploaded without a problem (regular export then regular import thru phpmyadmin from 5.1 to 5.6 MySQL different servers side by side with my laptop in the middle)



    2 - I went into the MySQL source data directory (depends on your system but on Centos 7 is in /var/lib/mysql/) and search the table with the problem, it has 3 files named after the table (table_name.MYD, table_name.MYI and table_name.FRM) you need to download those 3 manually thru FTP like Filezilla or copy into a USB)



    3 - Just in case, create a target blank temp_database and give all the rights to a user. MySQL creates an additional directory called temp_database where you are to copy those 3 files for that table. (dont need to mess with good upgraded tables, if you need to do upload all the tables, you can proceed to copy all the tables files into that new temp directory, is faster when you do copy directly without using MySQL)



    4 - Once you transfer the table files into that new target temp directory, then you will be able to see them on phpmyadmin (on the new server) as temp_database, check the table, make sure all data and records are there correctly, displayed and accounted for.



    5 - Since we created a copy thru FTP or a USB plain copy, then obviously the file is READ ONLY, and performing a check or repair table it will tell you so. You need to do CHMOD thru shell on those files so MySQL can process the repair. I guess, while repairing the file, it does the repair and upgrade of table format or any other version problems.



    6 - After you are happy with the table, and you can insert, update and delete one record as test, then you can just move that table or tables onto the right database using phpmyadmin to make everything work as usual. Remove that temp database and you are set.



    I have only performed that in that scenario, 5.1 to 5.6 upgrade. I don't know if same procedure will work for other versions, havent tryied, but anyone reading this article, can follow my procedure and update us if it does work with other versions of MySQL or other databases such as MariaDB, let us know.



    Hope it helps. Cheers.






    share|improve this answer










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      2 Answers
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      2 Answers
      2






      active

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      up vote
      0
      down vote













      You need to run mysql-upgrade --upgrade-system-tables (See Documentation)



      This will bypass checking all other tables and focus just on the mysql schema.






      share|improve this answer

























        up vote
        0
        down vote













        You need to run mysql-upgrade --upgrade-system-tables (See Documentation)



        This will bypass checking all other tables and focus just on the mysql schema.






        share|improve this answer























          up vote
          0
          down vote










          up vote
          0
          down vote









          You need to run mysql-upgrade --upgrade-system-tables (See Documentation)



          This will bypass checking all other tables and focus just on the mysql schema.






          share|improve this answer












          You need to run mysql-upgrade --upgrade-system-tables (See Documentation)



          This will bypass checking all other tables and focus just on the mysql schema.







          share|improve this answer












          share|improve this answer



          share|improve this answer










          answered Nov 22 at 22:04









          RolandoMySQLDBA

          140k24219370




          140k24219370
























              up vote
              0
              down vote













              I was able to upgrade only one table of my database this way : It worked for me. My scenario. MySQL 5.1 to 5.6 only I run into a problem upgrading one of my databases table (the biggest one), did not dump correctly and was rejected during upload to new server, took forever and timed out several times, so I had to do something out of the books. (Before you do download your database, do a complete backup, repair, check and all the maintenance required so you dont have messed up data in your new upload. Also, do a direct wire transfer, dont use wireless with large databases.



              1 - All my tables, except the biggest one, uploaded without a problem (regular export then regular import thru phpmyadmin from 5.1 to 5.6 MySQL different servers side by side with my laptop in the middle)



              2 - I went into the MySQL source data directory (depends on your system but on Centos 7 is in /var/lib/mysql/) and search the table with the problem, it has 3 files named after the table (table_name.MYD, table_name.MYI and table_name.FRM) you need to download those 3 manually thru FTP like Filezilla or copy into a USB)



              3 - Just in case, create a target blank temp_database and give all the rights to a user. MySQL creates an additional directory called temp_database where you are to copy those 3 files for that table. (dont need to mess with good upgraded tables, if you need to do upload all the tables, you can proceed to copy all the tables files into that new temp directory, is faster when you do copy directly without using MySQL)



              4 - Once you transfer the table files into that new target temp directory, then you will be able to see them on phpmyadmin (on the new server) as temp_database, check the table, make sure all data and records are there correctly, displayed and accounted for.



              5 - Since we created a copy thru FTP or a USB plain copy, then obviously the file is READ ONLY, and performing a check or repair table it will tell you so. You need to do CHMOD thru shell on those files so MySQL can process the repair. I guess, while repairing the file, it does the repair and upgrade of table format or any other version problems.



              6 - After you are happy with the table, and you can insert, update and delete one record as test, then you can just move that table or tables onto the right database using phpmyadmin to make everything work as usual. Remove that temp database and you are set.



              I have only performed that in that scenario, 5.1 to 5.6 upgrade. I don't know if same procedure will work for other versions, havent tryied, but anyone reading this article, can follow my procedure and update us if it does work with other versions of MySQL or other databases such as MariaDB, let us know.



              Hope it helps. Cheers.






              share|improve this answer










              New contributor




              Luis H Cabrejo is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
              Check out our Code of Conduct.






















                up vote
                0
                down vote













                I was able to upgrade only one table of my database this way : It worked for me. My scenario. MySQL 5.1 to 5.6 only I run into a problem upgrading one of my databases table (the biggest one), did not dump correctly and was rejected during upload to new server, took forever and timed out several times, so I had to do something out of the books. (Before you do download your database, do a complete backup, repair, check and all the maintenance required so you dont have messed up data in your new upload. Also, do a direct wire transfer, dont use wireless with large databases.



                1 - All my tables, except the biggest one, uploaded without a problem (regular export then regular import thru phpmyadmin from 5.1 to 5.6 MySQL different servers side by side with my laptop in the middle)



                2 - I went into the MySQL source data directory (depends on your system but on Centos 7 is in /var/lib/mysql/) and search the table with the problem, it has 3 files named after the table (table_name.MYD, table_name.MYI and table_name.FRM) you need to download those 3 manually thru FTP like Filezilla or copy into a USB)



                3 - Just in case, create a target blank temp_database and give all the rights to a user. MySQL creates an additional directory called temp_database where you are to copy those 3 files for that table. (dont need to mess with good upgraded tables, if you need to do upload all the tables, you can proceed to copy all the tables files into that new temp directory, is faster when you do copy directly without using MySQL)



                4 - Once you transfer the table files into that new target temp directory, then you will be able to see them on phpmyadmin (on the new server) as temp_database, check the table, make sure all data and records are there correctly, displayed and accounted for.



                5 - Since we created a copy thru FTP or a USB plain copy, then obviously the file is READ ONLY, and performing a check or repair table it will tell you so. You need to do CHMOD thru shell on those files so MySQL can process the repair. I guess, while repairing the file, it does the repair and upgrade of table format or any other version problems.



                6 - After you are happy with the table, and you can insert, update and delete one record as test, then you can just move that table or tables onto the right database using phpmyadmin to make everything work as usual. Remove that temp database and you are set.



                I have only performed that in that scenario, 5.1 to 5.6 upgrade. I don't know if same procedure will work for other versions, havent tryied, but anyone reading this article, can follow my procedure and update us if it does work with other versions of MySQL or other databases such as MariaDB, let us know.



                Hope it helps. Cheers.






                share|improve this answer










                New contributor




                Luis H Cabrejo is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
                Check out our Code of Conduct.




















                  up vote
                  0
                  down vote










                  up vote
                  0
                  down vote









                  I was able to upgrade only one table of my database this way : It worked for me. My scenario. MySQL 5.1 to 5.6 only I run into a problem upgrading one of my databases table (the biggest one), did not dump correctly and was rejected during upload to new server, took forever and timed out several times, so I had to do something out of the books. (Before you do download your database, do a complete backup, repair, check and all the maintenance required so you dont have messed up data in your new upload. Also, do a direct wire transfer, dont use wireless with large databases.



                  1 - All my tables, except the biggest one, uploaded without a problem (regular export then regular import thru phpmyadmin from 5.1 to 5.6 MySQL different servers side by side with my laptop in the middle)



                  2 - I went into the MySQL source data directory (depends on your system but on Centos 7 is in /var/lib/mysql/) and search the table with the problem, it has 3 files named after the table (table_name.MYD, table_name.MYI and table_name.FRM) you need to download those 3 manually thru FTP like Filezilla or copy into a USB)



                  3 - Just in case, create a target blank temp_database and give all the rights to a user. MySQL creates an additional directory called temp_database where you are to copy those 3 files for that table. (dont need to mess with good upgraded tables, if you need to do upload all the tables, you can proceed to copy all the tables files into that new temp directory, is faster when you do copy directly without using MySQL)



                  4 - Once you transfer the table files into that new target temp directory, then you will be able to see them on phpmyadmin (on the new server) as temp_database, check the table, make sure all data and records are there correctly, displayed and accounted for.



                  5 - Since we created a copy thru FTP or a USB plain copy, then obviously the file is READ ONLY, and performing a check or repair table it will tell you so. You need to do CHMOD thru shell on those files so MySQL can process the repair. I guess, while repairing the file, it does the repair and upgrade of table format or any other version problems.



                  6 - After you are happy with the table, and you can insert, update and delete one record as test, then you can just move that table or tables onto the right database using phpmyadmin to make everything work as usual. Remove that temp database and you are set.



                  I have only performed that in that scenario, 5.1 to 5.6 upgrade. I don't know if same procedure will work for other versions, havent tryied, but anyone reading this article, can follow my procedure and update us if it does work with other versions of MySQL or other databases such as MariaDB, let us know.



                  Hope it helps. Cheers.






                  share|improve this answer










                  New contributor




                  Luis H Cabrejo is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
                  Check out our Code of Conduct.









                  I was able to upgrade only one table of my database this way : It worked for me. My scenario. MySQL 5.1 to 5.6 only I run into a problem upgrading one of my databases table (the biggest one), did not dump correctly and was rejected during upload to new server, took forever and timed out several times, so I had to do something out of the books. (Before you do download your database, do a complete backup, repair, check and all the maintenance required so you dont have messed up data in your new upload. Also, do a direct wire transfer, dont use wireless with large databases.



                  1 - All my tables, except the biggest one, uploaded without a problem (regular export then regular import thru phpmyadmin from 5.1 to 5.6 MySQL different servers side by side with my laptop in the middle)



                  2 - I went into the MySQL source data directory (depends on your system but on Centos 7 is in /var/lib/mysql/) and search the table with the problem, it has 3 files named after the table (table_name.MYD, table_name.MYI and table_name.FRM) you need to download those 3 manually thru FTP like Filezilla or copy into a USB)



                  3 - Just in case, create a target blank temp_database and give all the rights to a user. MySQL creates an additional directory called temp_database where you are to copy those 3 files for that table. (dont need to mess with good upgraded tables, if you need to do upload all the tables, you can proceed to copy all the tables files into that new temp directory, is faster when you do copy directly without using MySQL)



                  4 - Once you transfer the table files into that new target temp directory, then you will be able to see them on phpmyadmin (on the new server) as temp_database, check the table, make sure all data and records are there correctly, displayed and accounted for.



                  5 - Since we created a copy thru FTP or a USB plain copy, then obviously the file is READ ONLY, and performing a check or repair table it will tell you so. You need to do CHMOD thru shell on those files so MySQL can process the repair. I guess, while repairing the file, it does the repair and upgrade of table format or any other version problems.



                  6 - After you are happy with the table, and you can insert, update and delete one record as test, then you can just move that table or tables onto the right database using phpmyadmin to make everything work as usual. Remove that temp database and you are set.



                  I have only performed that in that scenario, 5.1 to 5.6 upgrade. I don't know if same procedure will work for other versions, havent tryied, but anyone reading this article, can follow my procedure and update us if it does work with other versions of MySQL or other databases such as MariaDB, let us know.



                  Hope it helps. Cheers.







                  share|improve this answer










                  New contributor




                  Luis H Cabrejo is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
                  Check out our Code of Conduct.









                  share|improve this answer



                  share|improve this answer








                  edited Dec 8 at 2:04





















                  New contributor




                  Luis H Cabrejo is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
                  Check out our Code of Conduct.









                  answered Dec 8 at 0:57









                  Luis H Cabrejo

                  12




                  12




                  New contributor




                  Luis H Cabrejo is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
                  Check out our Code of Conduct.





                  New contributor





                  Luis H Cabrejo is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
                  Check out our Code of Conduct.






                  Luis H Cabrejo is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
                  Check out our Code of Conduct.






























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